Focusing on internal control:
* Self-regulation
* Autoregulation
* Homeostasis (if referring to biological processes)
* Internal control
* Inherent regulation
Focusing on inherent nature:
* Natural regulation
* Innate regulation
* Organic regulation
Focusing on a specific process:
* Feedback loop (if referring to a cyclical process of self-adjustment)
* Adaptive mechanism (if referring to a process that adjusts to changes in the environment)
The best alternative will depend on the specific context and what aspect of "intrinsic regulation" you want to emphasize.