Formal:
* Oui, tout va très bien. (Yes, everything is going very well.)
* Tout se passe très bien. (Everything is going very well.)
Informal:
* Oui, tout va super. (Yes, everything is going great.)
* Tout roule. (Everything is rolling.)
* Nickel ! (Perfect!)
More detailed:
* Oui, tout va très bien, merci. (Yes, everything is going very well, thank you.)
* Tout va comme sur des roulettes. (Everything is going smoothly.)
The best way to choose the right phrase depends on who you are talking to and the situation.