More neutral:
* Hint
* Suggest
* Imply
* Implicate
* Allude to
* Mention indirectly
More negative:
* Impugn
* Slander
* Defame
* Suggest subtly
* Whisper
* Intimate
* Drop a hint
* Cast aspersions on
* Undermine
More formal:
* Infer
* Connote
* Denote
* Imply
The best synonym will depend on the context of your sentence and the specific meaning you want to convey.